Clustering

We will select resolution 1

Recheck quality of clusters

CD45 expression (immune cells)

Known marker genes

Preliminary annotation

Top markers

Cell composition

High-res annotation

Cancer Hallmarks

Ribosomal content

Oxidative Phosphorilation

TCR/BCR

Explore the TCR and BCR repertoires captured (if available).

## [1] "Percentage of T cells that have a TCR (TRUE) and don't have one (FALSE)."

Back to top